My Research: Carabid networks in a variable landscape

19 01 2013

In this study, I will be setting up sets of pitfall traps (preservative-filled cups in the ground that ground insects fall into) in ecosystems with very different habitat types, e.g. a forest with clustered tree species and shrub types, clearings, human structures, ponds.

This will not only give me a good estimate of the ground insect diversity, it will also allow me to analyse landscape patterns and networks. In other words, I will be studying how insects move around the landscape. Do some species become isolated in certain habitats? What habitats serve as corridors through which species can move? Are there any habitat combinations that foster a particularly active or biodiverse community?

Such a study provides important data for environmental management. It’s fallacious and oversimplistic to view a forest as a single habitat, because it’s an ecosystem comprising of many habitats that vary at a small spatial scale. An environmental manager absolutely needs to take this into account before approving any changes. Data accumulated from such studies allow a limited, but crucial, amount of prediction to be made for the effects of human modification, from logging to reforestation to construction of artificial lakes. The same is true for agricultural managers and farmlands: do hedgerows serve as habitats and corridors in otherwise inhospitable arable land? How does intercropping affect insect movements? What is the best solution to keep pollinator biodiversity up while reducing pest numbers?

My analysis will be focused on carabid beetles, most probably in a forest landscape (because I don’t want to get shot by a farmer while doing fieldwork), but other groups and ecosystems can be examined in due time, or by interested parties or universities/schools.





Top Research of 2012: Environmental

1 01 2013

Jump to: Arthropods; Botany; Developmental Biology; Ecology; Evolution; Geology; Historical Geology; Human Evolution; Palaeontology; Zoology.

This is a listing of my top 10 environmental research of the year. I don’t follow energy or sustainability research, so don’t expect anything on those; only climate change and its effects, and whatever else humans are doing to screw around with the planet and other species. The master list contains 19 paper. [OA] indicates open access papers.


10. Impacts of Biodiversity Loss Escalate Through Time as Redundancy Fades.

The single greatest danger to biodiversity isn’t climate change, it’s habitat loss and the resulting reduction in ecosystem complexity. This paper underlines this by finding that in the long term, species richness in an ecosystem compounds its productivity, meaning that losing even a couple of species that may appear redundant will be damaging.


9. Ecosystem responses in the southern Caribbean Sea to global climate change.

itcz

As the graphs above show, this paper finds that phytoplankton abundances have experienced a sudden statistically significant decrease since ~2005 in the Carribean, as measured by the CARIACO coastal station off the coast of Venezuela. This is linked to changes in hydrological and circulation cycles (specifically the ITCZ and the Azores High) caused by global warming: they lead to less upwelling, warmer water at the surface, and more stratification, which overall leads to less nutrients, and thus less productivity.


8. The 27–year decline of coral cover on the Great Barrier Reef and its causes. [OA]

greatcoralreef

The result of this study is summed up in B above: a halving of the living coral cover in the Great Barrier Reef from 28% to 13.8% from 1985 to today. If that’s not cause enough for concern, realise that the GBR is one of the most protected marine localities, and it’s a World Heritage Site. Despite that, it’s getting devastated (no need to mince words). The reason for the coral deaths here are increased bleaching (driven by higher temperatures), lower water quality (global warming leading to increased precipitation, leading to more run-off into the ocean), and lower growth rates (warming leads to thermal stress). Corals are some of the most sensitive organisms living today, and this paper just gives us a glimpse of what the marine future will be like.


7. Blue Whales Respond to Anthropogenic Noise. [OA]

dcalls

In the diagram above, the orange Ds indicate when blue whales did D calls, characteristic low-frequency calls they make when foraging. In the presence of ship sonar, the calls stop. When ships are around, D calling increases, most likely to overome the sounds made by the ship (similar to how urban birds sing more loudly than their rural counterparts). What the functional effects of these influences are still need to be researched, and probably will be soon given that blue whales are endangered.


6. Fukushima-derived radionuclides in the ocean and biota off Japan. [OA]

Oh dear, oh dear, caesium levels in the ocean rose 1000 times in the aftermath of Fukushima! That sounds like a big number, until you realise that they’re still less than naturally occurring radionuclides, like polonium. Think about this next time you want to use Fukushima as an example of a nuclear disaster.


5. Sea anemones may thrive in a high CO2 world.

I may sound like a bitter alarmist when speaking about climate change, but I also like to remind people that climate changes happen all the time, and while this one is drastic, there will alwways be some organisms who will profit (it just so happens that humans will not be one of them, for better or for worse). This paper finds that sea anemones might be one of those who profit: ocean acidification appears to enhance their productivity and growth. They don’t have a calcified shell to worry about maintaining, hence their getting a leg up over calcifying corals and molluscs.


4. Adaptive evolution of a key phytoplankton species to ocean acidification.

This is an example of experimental evolution done well. Lohbeck et al. took Emiliania huxleyi, one of the most dominant coccolithophores, and let it evolve for 500 generations through serial transfers to increasingly more CO2-enriched water. They show that instead of dying out, they gradually adapted, increasing their growth in the higher acidic conditions by the end of the experiment. It’s only a lab experiment though, so it just shows that the possibility to adapt is there; whether this will occur in the rough-and-tumble of the wild cannot be guaranteed.


3. Extensive dissolution of live pteropods in the Southern Ocean.

pteropod

In #5, I made a distinction for calcified organisms being more affected by ocean acidification because of their shells. This paper gives the starkest example of this using pteropods: in the pictures above, a and b are regular shells; c and d are under slight acidification; e and f are at high acidification, and the shell is extremely deteriorated because of its dissolution – and these are from the wild (the paper also has experimental analyses to determine at what level they dissolve). There is no need to stress how damaging this is to pteropods, and similar effects are observed in all calcium carbonate-shelled organisms.

Ocean acidification induces budding in larval sea urchins is a relevant paper that shows a negative response by sea urchins to ocean acidification: larval budding, leading to unviable clones.


2. Genetic consequences of climate change for northern plants. [OA]

gendiv

Climate change will affect plants by reducing their range and by reducing their genetic diversity. This paper estimates just how much genetic diversity will be lost in 27 alpine and arctic species by 2080, under a range of climate models. It’s a lot, although it does vary by species and model, and most of these plant species will fall into the endangered category if the IUCN starts taking genetic diversity into account (which they probably will at some point). So, bad news.


1. A synthesis of carbon dioxide emissions from fossil-fuel combustion. [OA]

ffco2

I am making an exception and adding a review paper, because this one really is excellent and thorough, and a great placeholder until the new IPCC report comes out. If you need up-to-date data on CO2 emissions from fossil fuels, and details on how those numbers are compiled and calculated, this is exactly the paper you want.


Jump to: Arthropods; Botany; Developmental Biology; Ecology; Evolution; Geology; Historical Geology; Human Evolution; Palaeontology; Zoology.





Top Books of 2012: Environmentalism and Climate Change

20 12 2012

Jump to another list: Evolution; Historical Geology; History of Science; Human Evolution and Anthropology; Palaeontology; Zoology

Welcome to the first post of my “2012 in review” series, which will have one post every day for the next 2-3 weeks. The first 7 posts will be lists of the top 10 books of the year for a specific category: Environmentalism and Climate Change; Evolution; Historical Geology; History of Science; Human Biology; Palaeontology; and Zoology (ordered alphabetically). These will be followed by top 10 discoveries/papers of the year in all the fields I usually cover, topped off with an absolute top 10 discoveries, and finally a review of the blog’s progress in 2012 and future outlook.

Anyway, let’s start off with the environmentalism books. I use “environmentalism” as an umbrella term for all the important issues we’re facing today that are associated with a changing environment and its impact on the bio- and anthroposphere, including climate change, extinctions, and energy production. The books include only academic and popular books, not standard textbooks.

  1. Weart. The Rise of Nuclear Fear. (Harvard University Press)
riseofnuclearfear 2011 saw one of the strongest natural disasters in history hit the coast of Japan, but the media and populistic fallout from it was far worse than any purported nuclear fallout. If there is one word to summarise it, it would be “ridiculous”, especially in this day and age when the only way out of our mess is to let go of silly emotional arguments and embrace facts – and the facts are clear that nuclear power is one of the safest ways to make energy, and by far the best transitional energy source until we get renewables properly sorted out. This book examines the historical and cultural backgrounds to the hysteria behind the anti-nuclear movement and in so doing, provides an objective resource to the pros and cons of nuclear energy – it chastises the exaggerations made by both sides.

  1. Berezon & Campbell. Science Left Behind: Feel-Good Fallacies and the Rise of the Anti-Scientific Left. (PublicAffairs)
antiscienceleft My ranking this book as #2 should tell you just how much I despise what I see as a profoundly anti-scientific environmental movement. It’s so pervasive and embarrassing that I hesitate to call myself an environmentalist, because I know I’ll be lumped in with nature-worshipping and science-ignorant New Age hippies – an attitude commonly seen on the left side of the spectrum, both in Europe and apparently in the USA too. This book is Americentric, and it focuses generally on science denialism, but the attitude is one that affects environmental issues too, hence my categorising it here.

  1. Stone. The City and the Coming Climate: Climate Change in the Places We Live. (Cambridge University Press)
cityclimate There are many books that deal with climate change generally and its impact on the biosphere and human health, but this one is unique by concentrating on how the effect of climate change is amplified in cities, and how this will affect our urban lives, and makes a very strong point that even if we manage to reduce our greenhouse gas emissions, we will still be forced to do permanent changes to our lifestyles in order to be sustainable.

  1. Seidl. Finding Higher Ground: Adaptation in the Age of Warming. (Beacon Press)
8598 This is actually a 2011 book but was only released in paperback this year, so I’m sort of cheating by putting it here. It deserves it in any case. Book #3 made the point that climate change is going to affect our lives no matter how much we curb our emissions. This book links up with it thematically by giving examples from both human history and the biosphere on how to adapt to climate change. Even if you don’t care for that theme, the compendium of information itself is useful, if only as trivia.

  1. McKibben. The Global Warming Reader: A Century of Writing About Climate Change. (Penguin Books)
the-global-warming-reader-a-century-of-writing-about-climate-change This book is an anthology of the essential writings on climate change, collected by one of the leaders of the field. They range from purely academic accounts, to call to arms, and even include some of the skeptical views for good measure. If you need a resource on thoughts on climate change and their history, the development of the science behind climate change, or just answers to your questions with a historical twist, then this book is for you.

  1. Sale. Our Dying Planet: An Ecologist’s View of the Crisis We Face. (University of California Press)
our-dying-planet-an-ecologists-view-of-the-crisis-we-face There are relatively few books on climate change written by those who experience and research it first hand, and this book fills the gap perfectly, giving a perspective from the point of view of a coral researcher, i.e. from someone who researches the ecology of one of the most climate-sensitive organismal groups on Earth. This account gives the issue of climate change a tangible sense of what is ecologically at stake, away from the usual statistics on atmospheric conditions and tales of political and social inaction.

  1. Boyle (ed.). Renewable Energy: Power for a Sustainable Future. (3rd ed., Oxford University Press)
414lKy7pYWL._SL500_AA300_ I know I said no textbooks, but it would be a shame if I left this list with no book on renewable energies, and this 3rd edition of Renewable Energy is the gold standard. It’s UK-centric, but when it comes to information about the actual technology and possibilities, it’s up-to-date and applicable for any country. It’s at an undergraduate level too, so it doesn’t take much to get a hang of it – and the excellent diagrams will make sure you can grasp any concept presented.

  1. Cowie. Climate Change: Biological and Human Aspects. (2nd ed.; Cambridge University Press)
170544329 Every year sees the release of an excellent academic text on climate change summarising all aspects of what we know. This is this year’s version of that book, and it’s a useful tome for anyone looking for the most current and up-to-date resource book on climate change.

  1. Rogers, Johnston, Murphy & Clarke (eds.). Antarctic Ecosystems: An Extreme Environment in a Changing World. (Wiley-Blackwell)
1405198400 This is the most expensive book that will be in any of the lists, and I arguably shouldn’t even have included it because it’s beyond the reach of most, and it’s not really focused on environmental issues. I decided to put it in here for two reasons: it’s the best available summary of Antarctic biology and ecology, and I personally view Antarctica as one of the most ideal places to observe the effects of environmental change, a view that is reinforced time and again in all case studies discussed in the book. If you’re a working biologist interested in climate change, you should try and find this book (preferably through an institutional library to not break your bank account).

  1. Alcamo & Olesen. Life in Europe Under Climate Change. (Wiley-Blackwell)
{C117E825-4FEF-477F-B8D2-01796E4392C1}Img100 The book that rounds off the list is Eurocentric, focusing on how the climate will change in Europe and those changes’ effects on European cities. Spoiler alert: things don’t really look good except for Northern Europe, and there will be changes even there. While the specifics of the climate changes described are only applicable for Europe, the sustainability and adaptability themes are applicable globally for developed countries, so you might find a use for the book even if you’re not European.

Jump to another list: Evolution; Historical Geology; History of Science; Human Evolution and Anthropology; Palaeontology; Zoology





Using Microalgae to Clean Up Coal Plants

11 01 2012

This is a guest post by Sophie.

In 2009, at least 7994703000 tons (~8 billion tons) of coal were used globally (EIAa), with a resulting 13393577 tons of CO2 released as a result (EIAb) – and that’s not counting countries with no statistics. This makes coal the dirtiest energy source available. Read the rest of this entry »





The Potential of Microalgae for Biofuels: Use of Wastewater

8 12 2011

This is the first guest post, by Sophie. The original manuscript is 12 pages long, and will be split into several posts.

According to Worldmapper data, itself sourced from the World Bank and the United Nations Environment Program, 3937 km³ of freshwater were used globally in the year 2000. Between 1987 and 2003, 325 m³ of freshwater were used domestically per year; 2.4 trillion m³ used agriculturally; and 665 billion m³ industrially. Read the rest of this entry »








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