Talk Announcement: The Development of Mediterranean Coral Reefs: Insights From Cypriot Palaeontology

18 10 2012

I’m going to be babbling on November 1, 16:00 at the Cyprus Institute, Nicosia, about The Development of Mediterranean Coral Reefs: Insights From Cypriot Palaeontology. If any Cypriots (a grand total of 2.13% of the past 7 days’ readers) are around, feel free to drop by. International readers, don’t bother, it’s mostly a research talk, part of the Cyprus Institute’s seminar series. I’ll be giving an overview of the geological history of corals in the Mediterranean, then highlighting how Cyprus can complete the picture with overviews from my research (which, of course, is desperately in need of funding money *wink wink*).

As usual, it’ll be uploaded several days after the talk, with complete notes.





Imaginary Ramblings: My Perfect Natural History Museum

4 07 2012

I’m a huge fan of natural history museums, especially zoological museums (see this post on their origin). Every time I go to a new city, the first thing I visit is its NHM. On a recent fieldtrip (token postcard picture up there), my partner suggested that I should open a natural history museum for Cyprus with all the samples that I’ve collected. This is, of course, pure fantasy – such an endeavour would never get funded locally, and a finished museum would never be visited by Cypriots anyway (a cynical view, but one that will be corroborated by any Cypriot you speak to). But hey, if any reader happens to be acquainted with a millionaire with money to spare for science education for a country sorely lacking in science knowledge, feel free to hook us up (alternatively, link them to my Petridish project!). And make no mistake, the only reason I’m not opening such a museum is because it costs too much money in just sample preparation costs, just to buy the materials and chemicals necessary (I haven’t even considered things like electricity or building space or poster printing costs).

Anyway, it is an interesting thought experiment, and as someone who’s worked in museum-related activities (museum guide, small-time curatorial work, a lot of sample preparation), I’ll admit I’ve often thought about what the “perfect” NHM would be like (note that I’m referring only to the public side of the museum in this post; the research side that makes up the bulk of any NHM but that the public barely sees functions like any academic institution).

Perfection is subjective of course, so before starting off, I’ll define what, to me, the goal of an NHM is, because my opinion might differ from others’. To me, the goal of an NHM is primarily to inspire, with education being a secondary goal. Of course, up to a certain age, any exhibit will necessarily be educational, but a museum that dedicates itself to a purely educational cause is bound to restrict its audience to schoolchildren.

Allow me to give you an example. The most awesome museum exhibit I’ve been to is the Darwin exhibit of the Zoological Museum in Copenhagen. If you haven’t been there, definitely pay it a visit. The exhibit had two rough parts: one on Darwin, with a recreation of Darwin’s workplace on the Beagle and at home. But the majority of the floor was devoted to exhibiting the diversity of animal life. Vertebrates dominated due to their sheer size, but at the far end of the room, the entire wall was dedicated to displaying a tree of animal life, with specimens instead of names. So you had a giant wall with all sorts of animals pinned on it. Of course, I learned nothing new while looking at this. But I was so inspired that when I got back home, I thumbed through some of the lesser explored parts of my invertebrate zoology textbook (a plump 980-page hardback) just because the exhibit awakened this desire in me to learn more. This, to me, is the goal of an NHM: to stimulate people of all types, from experts to laymen to children, to learn more. Go to an exhibit, come back home with a sense of wonder, and hop on Wikipedia or buy a science book.

Also, an NHM shouldn’t be a place you visit once. The exhibits have to be engrossing enough to really take people in so that they don’t have time to visit the other exhibits. This isn’t a money-making ploy (I would sell tickets that are valid multiple times to make up for this effect). It’s to ensure that the visitors really get a sense of how treasurable what they’re seeing is. If they just breeze through a museum, nothing will stay in.

With all that in mind, I will describe what my NHM would be like, if I were given an infinite budget and no restrictions. To me, “natural history” encompasses three areas: geology, biology, and palaeontology. And the NHM has to have two aspects: the general aspect with the basics of a subject, as well as a focus on the local natural history, because the latter will allow visitors to really connect with the stuff on display, and encourage them to do some exploring on their own (or with organised field trips with the museum experts).

Biology: General

“Biology” is an enormous discipline. In the general section, I would include exhibits on evolution, ecology, and biodiversity.

The evolution exhibit is probably the toughest to do, since evolutionary biology is such a broad subject consisting of many disparate fields. For a basic display, what must be included are:

  • History: poster going from Darwin to Modern Synthesis to evolution nowadays;
  • Genetics: poster about DNA and mutations;
  • Natural selection: poster, and an exhibited example that changes every month;
  • Speciation: poster, and an exhibited example that changes every month;
  • Evolution and society: examples of evolution in action from medicine and agriculture; I’m torn about including creationism and countering accomodationist dreck since it would count as intellectual pollution, but at least in Cyprus, a thorough smackdown is necessary (also, it carries a security risk around these parts).

The ecology exhibit is a tough one. What I would include is idealised models of local ecosystems – a pine forest, an arid grassland contrasted with a rainy-season grassland, typical Mediterranean garrigue and chaparral, a salt lake, a dry vs. wet vernal pond, and various marine depths. Animals will be included as prepared specimens on a painted background, and (holographic!) panels explain the major life cycle points (e.g. the life cycle of anostracans in the vernal ponds). As for other ecosystems (Arctic tundra, alpine, tropical rainforest, etc.), these can be featured one by one, on rotation every couple of months.

All the exhibits, even from the opther sections, will pale in comparison with the biodiversity exhibit. I imagine this taking up the space of an entire warehouse (including a bathroom and some benches for people to rest). My concept is taking the Goldfuß Museum from my old university and hyping it up on steroids. It’s the old-skool style of NHM, with rows of systematised cabinets showing off individual specimens, highlighted only with a taxonomic name plate. I love this style, but you won’t find it in many NHMs anymore because it’s not flashy. So I will modify it to include another old-skool favourite of mine, cabinets of curiosities, those frames and cabinets with random animals pinned together for purely aesthetic value. They look amazing and I have no idea how they went out of fashion. So the following paragraph describes how my perfect biodiversity exhibit would be like.

One side of the warehouse is devoted to animals, with 25 cabinets laid out in rows along the length of the warehouse. Each cabinet contains several things. Specimens of constituent animals placed together in a cabinet-of-curiosities-style display will make up the center of the display case, with individual specimens representing each major grouping making up the rest of the case. Each cabinet will have two drawers. One will contain texts explaining the phylogeny and anatomy of the animals. The second will be the true pièce de resistance, containing specimens for individual study. Whole organisms and dissected one, studiable under a magnifying glass, stereoscope, microscope, whatever is most appropriate, with a guide to help of course. This is the true tour de force that my museum will have. Few experiences are cooler and more awe-inspiring than the first glimpse of an insect at very high magnification, and seeing all the tiny hairs and details. My museum would provide this exclusively taxonomical experience to everyone. The cabinets are as follows: Porifera, Cnidaria, Ctenophora, Plathelminthes, Gnathifera, Nemertini, Kamptozoa, Mollusca (x3), Sipuncula, Annelida (x2), Arthropoda (x4), Nemathelminthes, Tentaculata, Hemichordata, Echinodermata (x2), Chordata (x2), Misc. (Placozoa, Myxozoa, Chaetognatha, Xenoturbellida, Mesozoa).

The other side of the warehouse is similarly devoted to plants, and is laid out similar to the animal one (done after consultation with a botanist to ensure similarly complete taxonomic coverage). The style will be similar to a herbarium with pressed plants, but if a gardening team can be hired, I see no reason why this section can’t be covered as a greenhouse and turned into a mini-botanical garden in order to properly cover trees.

Two major sections of biodiversity are left: unicellular eukaryotes and fungi, and bacteria. In an allusion to history, a cabinet devoted to fungi can be placed between the plant and animal rows, next to the entrance to the geological section of the museum (with a panel describing why they’re placed like this). As for the micro-stuff, I know of no way to observe the majority of them at any time, so leaving microscopes with pond scum samples isn’t too useful. My idea would be to have the walls plastered with a wallpaper depicting each baterial and unicellular eukaryote lineage (each “tile” is a different lineage, with a giant labelled drawing of the creature). Algae, cyanobacteria, and other photosynthetics can be used to cover the walls on the plant side; the rest on the other walls, making sure that the opisthokonts are concentrated on the animal side.

Viruses can be crammed in somewhere too, it is a warehouse after all.

Every month, a taxon will be chosen by visitor polling, and will be highlighted with its own prominent cabinet. Taxon can be anything between family and order level (only exceptional species, genera, or subfamilies deserve such special treatment).

Biology: Local

As I said, each museum section also has to have exhibits about the local natural history, so what I am writing here applies only for Cyprus. The exhibits are: biogeography; endemics; island ecology.

The biogeography exhibit places Cyprus in its context in the Eastern Mediterranean. Besides posters with distances, bird migration routes (Cyprus is a major stopover point for all kinds of worldwide migrations), and ocean currents (important for marine biogeography), there will also be exhibits showcasing the similarities and differences between Cypriot ecosystems and those of North Africa, the Middle East, Turkey, and Greece (the closest neighbours).

The endemics exhibit is obvious: specimens of endemics presented as in the biodiversity cabinets (complete with examinable portions), with very generalised ecological information. The lack of precision is purposeful, to prevent people from needlessly collecting from these often-endangered populations. Endemic plants and animals only; sorry, microbiologists.

The island ecology exhibit is one that’s shared with the palaeontological section. It describes the peculiarities of evolution on islands, with examples from Cyprus. For example, dwarf hippo and elephant fossils can be showcased to show island dwarfism.

Palaeontology: General

This would have three exhibits (including another mammoth one, pun not intended): fossilisation, history of life on Earth, and the fossil record.

The fossilisation exhibit is a simple outline of the processes underlying fossilisation and taphonomy, from initial death and burial to diagenesis and actual fossilisation. The first parts can have practical demonstrations showing how fossils can get buried in different positions, how trace fossils are formed, etc.

I envision the history of life on Earth exhibit as taking up one room, with visitors walking through a snaking trail going from the origin of life all the way to the Quaternary. Each 50 Ma can be one regular step (number can be changed), Important fossil localities and first appearance of taxa can be highlighted at the appropriate times with specimens, and key events can have a panel dedicated to them (the mass extinctions, Cambrian Radiation, terrestrialisation, etc.).

Finally, the fossil record exhibit uses the same principles as the biodiversity exhibit, with some key differences due to the nature of the fossil record. The room is split into three longitudinal sections: one for palaeobotany, one for invertebrates, one for vertebrates. The major taxa are gone through, with a focus on extinct biodiversity. The texts describe the evolutionary history of the taxa, and fossil specimens can be examined as far as possible (you can’t stuff a T-Rex skull in a drawer). The two walls of the room are devoted to micropalaeontology. One for the taxonomic scope, and one for applied micropalaeontology (oil, stratigraphy).

Palaeontology: Local

Cyprus has quite a rich fossil record, practically uninterrupted for 70 Ma. Unfortunately, most of the older stuff is microfossil material, exhibitable only with magnifying glasses and stereoscopes. Witht hat in mind, I would have three exhibits: the fossil record of Cyprus, the Messinian Salinity Crisis, and the mammals of Cyprus.

The fossil record of Cyprus exhibit is just that: sedimentary rocks placed side by side in their temporal sequence, with explanations of what they tell us about the palaeoenvironment – painting a picture of hydrothermal vents (yes, there are hydrothermal vent fossils from Cyprus), followed by deep marine microfossils, and very gradual shallowing until we get to typical shallow marine stuff from the post-Messinian, eventually tocomplete terrestrialisation. The latter two are the focus of their own exhibits.

The Messinian Salinity Crisis (MSC) occurred 6-5 Ma when the Mediterranean dried out completely due to its connection to the Atlantic getting cut off. Cyprus preserves the state of the East Mediterranean before, during, and after the MSC (one of the things I would be researching if I had funding and weren’t an umemployed bum). The deposits from the post-Messinian Nicosia Formation are especially spectacular, with large, unbroken oysters, snails, barnacles, even crabs being common (the latter not so much). They not only make very nice show pieces, but combined with the information they tell us about the recovery and recolonisation process after the MSC, this exhibit would be quite informative.

The mammals of Cyprus exhibit refers to the dwarf elephants, hippos, and the first human colonisers of Cyprus (who also were pretty damn small). This exhibit is combined with the island ecology exhibit. The animals can be compared in size to regular African elephants and hippos, with the evolutionary, ecological, and physiological reasons behind their dwarfism explained.

Geology: General

There are two parts to this. The first is a lot of typical basic exhibits crammed together logically, not worth describing in detail: the composition of the Earth (shown with a typical dissected globe and labels); the rock cycle (poster); plate tectonics (poster with world map and evidence); volcanism (poster, with demonstration using Coke and Mentos, vinegar and bicarbonate of soda, whatever); earthquakes; sedimentology (with practical demonstration using an aquarium simulating a beach, visitors can create waves with a paddle and observe how ripples form as an example of sedimentological structures).

The second part is the mineralogical and petrological part, with exhibits showing the major minerals and rock types, complete with thin sections observeable with stereoscopes (with polarised light too, since there’s no budgetary limit in this fantasy land). This will also have a strong interactive element, with mineral and rock identification tests. One potential pitfall is the difficulty of getting proper lighting fixtures that highlight the minerals properly in the display cases, especially when it comes to rocks, but that can be surpassed (rotating platforms?).

Geology: Local

Cyprus played a pivotal role in the correct interpretation of what ophiolites are – pieces of uplifted oceanic crust. The Troodos mountains preserve the prototypical ophiloitic sequence impeccably and completely. So this makes it an ideal special exhibit.

A stratigraphical column made up of actual rock types can be prepared from Troodos rocks, demonstrating the composition of the oceanic crust from its bottom, through the Moho, to the top of the mantle, to the volcanic sequences from when uplift began, to the deep-water sediments. The column can have a map next to it showing the provenance of the rocks, highlighting how the entire sequence is inverted, with the peak of Troodos being the deepest part of the crust and the beginnings of the mountain being the umbers.

This can be supplemented by panels about each individual rock type and its formation, and what that tells about the the conditions under which it formed in Troodos.

A poster showing Cyprus’s role in the unlocking of the ophiolite mystery may help in getting people to wake up to the wonders of geology on this island – it’s amazing how this place is a must-visit for any geologist worth their salt, but Cypriots don’t know a thing about geology, which is openly spectacular (it’s no Grand Canyon admittedly, but some locations are truly jaw-dropping from a geological perspective).

Conclusion

So yeah, this would be my ideal NHM. Some parts are usual, others are unrealistic and way too idealistic, and the overall thing is unthinkable – it takes up way too much space. As a pragmatic person, I realise this would be impossible to achieve on this island of apathy; heck, it would be difficult enough anywhere else, unless I somehow end up running the Smithsonian or the Senckenberg or one of the other major museums. But hey, it’s nice to dream about it ^^





Cyprus as an Open Evolutionary Lab

11 06 2012

This post serves as an introduction to my interest in Cyprus as an open laboratory for cool, and potentially groundbreaking, evolutionary biology research. It’s an excerpt from a talk I gave several months ago, hence the slides as pictures.

The map above shows Cyprus’s position in the Eastern Mediterranean. The nearest continental landmass, the southern coast of Turkey, is 70 km away, followed by the Middle East 100 km away. Then comes North Africa at 350+ km away, and a distant Greece, over 500 km away. These distances are reflected in the fauna of Cyprus, which has a very distinct Middle Eastern feel to it.

All islands are viewed as excellent places for evolutionary research, and Cyprus is no exception. Its relative isolation is more than enough to make endemics out of any insects that don’t routinely migrate over long distances.

If one looks at the map where endemic plants are found, this relationship between isolation and endemism is easily observable. In green are areas where endemic plants are found, in white are where they’re absent. The pattern reflects very closely the level of agricultural and other human development: the white areas are all developed or agrarian areas, where human-mediated invasives have taken over the landscape. Protected and mountainous areas, on the other hand, are rich in endemic flora.

Such a map doesn’t exist for arthropods due to the lack of research, but a similar pattern can be expected, with endemic richness being much, much higher in the “wild” areas of Cyprus.

Map Source: Tsintides TC. 1998. The Endemic Plants of Cyprus.

For me, one of the most important questions to ask is how insects first came to the island; this is especially important to consider for insects that don’t fly very well or at all. There are generally four avenues for dispersal to an island.

The first, and most opportunistic/random, is rafting. As the name says, this is nothing more than getting stuck on afloating raft (of wood) and getting carried by the currents to the island. It may seem like a stretch, but the oceanography makes this possible, and we know that insects can survive for long periods of time on a block of wood. So it’s by all means logistically and theoretically possible, and has probably happened.

Another method is by using land bridges. This is where knowing some geololgical history comes in handy. Cyprus’s case is rather unique in that it formed completely in the ocean, with the central mountain range (Troodos) being nothing more than elevated oceanic crust (as we will see later) and having collided with the northern mountain range (Kyrenia), resulting in uplift of the central and coastal areas (and uplift that is still ongoing, albeit in a different tectonic context). So at no time during its formation was Cyprus connected to the mainland. However, 6 million years ago, the entire Mediterranean did dry up during the Messinian Salinity Crisis. The area between Cyprus, the Middle East, and Turkey was definitely crossable by any insect and spider. When the Atlantic flooded back, the organisms were left stranded on Troodos or Kyrenia.

A third method applicable to Cyprus is jump-dispersal, which is when multiple small islands form stepping stones to the large island. This, again, requires some geological knowledge. With the climate changes of the Pleistocene and Ice Ages, the Mediterranean’s sea level experienced some wild fluctuations. By this time, Cyprus had pretty much emerged from the sea and looked more or less like it does today. But with the sea levels fluctuating, the land between Cyprus, Turkey, and the Middle East became exactly as in the picture above, and some scenarios even suggest that it was completely dry, resembling a sort of salt marsh. In both cases, the way is easily traversable by all but the most immobile of arthropods, and when the sea levels became normal again, they were left all over the island.

The last, and most easily-detectable, way for insects getting onto the island is through humans, either purposely introduced as pest control (as is the case with some coccinellids, for example) or accidentally. And this has a very rich history in Cyprus’s case, given that Cyprus has been conquered by just about every major seafaring civiliation from Europe, North Africa and the Middle East at some point in its history. From living on the ships, to the products in the ships (timber or food), to the clothes of the sailors, this is by far the easiest way for any small insects to make their way around the world. Luckily, it can also be very easily accounted for using genetic tests.

The point here is that merely noting the current biodiversity of the island isn’t enough. In order to fully understand how the insect communities of the island developed (and thus how endemism came to be), we need to have this historical aspect in mind.

So, now the insects are on the island. How do the new species form? I already wrote a post on speciation, useful if you need some summary background on the processes involved. On Cyprus, there are three ways in which speciation can happen: by cladogenesis, by anagenesis, or by anacladogenesis.

Cladogenesis is a case of classic sympatric speciation. Population B arrives on Cyprus from the mainland and encounters different habitats and different ecologies than what they are adapted to. One part of the population colonises one habitat, the other colonises a different habitat (either by chance of where they land, or “on purpose”). Over generations, they will adapt to the new plants and abiotic conditions, and they will be new species, distinct both from each other and from the parent population.

Anagenesis can be summed up as “speciation without branching”, occurring as change accumulates in a single lineage. For our case in Cyprus, this can happen if the migrating population lands somewhere where the identical conditions and plants are found, which is likely considering the similarities in climate and flora of the closest landmasses. Additionally, there needs to be some amount of secondary remixing by travelling back and forth or occasional waves of migration – if they get geographically isolated with their own little gene pool, they are treated as a branched-off lineage arising by cladogenesis. But even with some remixing, there will be some isolation, and by genetic drift, mutations will slowly but surely accumulate within the Cypriot population, initially resulting in some reproductive isolation (as indicated by the i in the diagram). Eventually, this will result in complete speciation.

Anacladogenesis, as the name suggests, is a mixture of the two, with part of the population undergoing anagenesis by remaining in a place with similar ecologies and abiotic conditions, while another segment of the population colonises new ground and buds off to form a new species.

There is no way of predicting, in the absence of data, which of these has played a more important role in Cyprus. I would hypothesise the obvious: insects with good dispersal ability undergo anagenesis, while more immobile insects undergo cladogenesis. This will all be tested once I have baseline information on the taxonomy of the endemic insects.

What we’ve talked about so far has been general and more or less applicable to any landscape affected by invasion or to any island, but Cyprus still provides an extra experimental and data-gathering arena. What will now follow is a look at the scientific basis for my research.

First off, a purely theoretical look at the background of the main thesis, that increased mutation rates will lead to speciation. The flowchart above shows, generally, how macroevolution proceeds.

The foundational level in macroevolution is the genome – the entire collection of genes and sequences, both those that will be expressed at some point and those that will not. From this collection, a few select parts are activated during development of an organism. These tend to be evolutionarily conserved (indicated by the loop), as screw-ups during development are generally very deleterious.

Development leads to the building of the phenotype, of the individual. The phenotype then has a very tight interplay with ecology – which I lump here with natural history, so including things like behaviour and life cycles, not the least through functional morphology. Ecology in turn can modify the phenotype through environmental effects – more food leads to larger organisms, a preference for colder habitats leads to different phenologies, etc.

As I stressed in my natural selection lecture, the individual is where natural selection acts, because it’s the individual that survives and reproduces, not its genome. But, as the flowchart shows, the individual is itself dependent on development, which is itself derived from the genome. So, in effect, tracing the evolution of the phenotype can be done by looking at the evolution of its development. The action of natural selection on the phenotype and on development leads to an evolutionary response on the genome, making some parts of it invalid, or emphasising the roles of other sections.

This is how macroevolution works, basically. It’s nothing more than a feedback between development, the phenotype, and the genome, with the former two exerting their effect on the latter.

What my project aims to do is subvert this scheme on its head, by asking a hypothetical question: What if the diversity in the genome increases? Will that make the filter of development more porous and lead to higher phenotypical diversity, in turn leading to more ecological diversity and to speciation?

The answer known already is that yes, higher genomic diversity can lead to speciation, as evidenced by studies with gene or genome duplications. Where my project differs is that I am taking the question at a truly fine level, looking at individual mutations, and all in a well-constrained natural arena. The reason I can do this is only because of Cyprus and its geology.

The above picture summarises the geology of Cyprus. It’s split up into four units: the Kyrenia Mountains in the north, the Troodos Ophiolite in the center and west, with the sedimentary succession surrounding it, and the Mammonia Terrane to the west and southwest.

We’re interested in the Troodos Ophiolite. As you can see from the endemic plant distribution map, it’s clear that the endemic plants are mostly found in all the geological units besides the sedimentary one, but the Troodos Ophiolite is particularly well-inhabited – the patch in Mammonia, around the lake in Lemesos, is mostly due to the presence of unique salt marshes there, not due to geology per se.

The diagram on the left shows the structure of the Troodos Ophiolite. An ophiolite is nothing more than a piece of oceanic crust, and this discovery was done in Cyprus in the 1950s, thanks to the impeccable preservation of the Troodos sequence – other ophiolites tend to have bits and pieces of this sequence, in Troodos it’s complete. For orientation, the bottom of the diagram is actually the top of Mt. Olympus, and the top of the diagram is the lowland part of the mountains. So, in effect, when you drive up the mountain, you’re actually going back in time as far as geology is concerned. It’s quite surreal.

A detailed look at this falls outside the scope of the post. Suffice it to say that the bottom of the sequence, from the harzburgites to the plagiogranites, represent the rocks of the oceanic crust, from the deepest ones (subject to high temperature and pressure) to the shallow ones. The sheeted dykes and basalts are lava – the uplifting of the oceanic crust caused cracks to appear, and magma seeped through (sheeted dykes), spreading on the ocean floor (massive basalt) and reacting with the much colder ocean water (fractured basalt). After a certain period of uplift, volcanic action subsided and sediments accumulated on top of the whole thing. For some reason, when it was uplifted, the ophiolitic sequence of Troodos got flipped upside down, resulting in the oldest rocks (harzburgites and lherzolites) being found at the top and the sediments at the bottom.

Diagram source: Edwards S, Hudson-Edwards K, Cann J, Malpas J & Xenophontos C. 2010. Classic Geology in Europe 7: Cyprus.

Geology serves as a basement, and gets eroded and degraded by plants to form soil. Thus, the characteristics of the soil are intrinsically linked to the mineral content of the underlying geology. In this case, we have water reacting with olivine-rich rocks of the oceanic crust and hydrating them – this leads to the formation of serpentine minerals.

The soil derived from this group of rocks and minerals is correspondignly called a serpentine soil, and its main, relevant characteristics are shown on the right. First is very low concentrations of elements typically critical for plant growth, including potassium, nitrogen, phosphorus, and calcium. This means that only specific plants can actually grow here.

Making matters worse for the plants, and gloriously exciting for me, is the second characteristic: high concentrations of heavy metals. Iron and magnesium levels are especially increased, but chrome, nickel, and cobalt levels are also notable. Heavy metals are known to be hazardous as mutagens, and so the pool of plants that can grow on heavy-metal enriched soils increases.

And here Is where the geology ties back to my previous scheme of macroevolution and the question I’m asking. As mutagens, heavy metals will increase the diversity of the genome, and so will provide a natural experimental set-up to test my hypothesis.

There is no data to go on yet for Cyprus – that’s why I’m trying to get the project funded. But there is another region in the world where ecology on serpentine soils is being studied: California. California has an area of ~424000 km². Serpentine underlies 6000 km² of that, so only 1.5%.

Yet, as the graph above shows, the percentage of endemic plant species in this tiny patch is equal to or greater than the percentage of plant species in the rest of California. This is mostly due to the inhibitory nature of the soil, with the high heavy metal concentrations and low critical element concentrations.

Graph source: Safford HD, Viers JH & Harrison SP. 2005. SERPENTINE ENDEMISM IN THE CALIFORNIA FLORA: A DATABASE OF SERPENTINE AFFINITY. Madroño 52, 222-257.

But it is also valid to ask whether higher microevolution rates, caused by the mutagenic heavy metals, can also play a role. My not being a botanist (although with an interest in plant physiology) prevents me from investigating this with plants in Cyprus. However, one of the first lessons in ecology and environmental sciences is about bioaccumulation, that toxicity accumulates the higher up a food web one goes. And the next level is, of course, the myriad insect herbivores, followed by the carnivorous insects and spiders, and all supplemented by the omnivores and detritivores.

So, if any effect on microevolution rates are there, they can just as easily be observed in the associated animals, in which case I can inject my own disciplinary bias and look at the topic as a macroevolutionary problem.

If the effect is not observed, then an equally valid question to ask is “why?”. Why don’t the heavy metals affect the animals and their mutation rates? Do they simply not go up the food web (and if so, why?), or do they do so but physiological mechanisms prevent them from having an effect (if so, what are these mechanisms?).





Cypriot Biodiversity Captured in 3 Minutes

9 06 2012

I went on a fieldtrip up to the mountains yesterday, exploring some areas I hadn’t been to before. Among the things I discovered was this abandoned house with a blooming apple tree in front of it.

Apple trees are commonly cultivated or found wild at high altitudes – and I was only 200 meters below Mt. Olympus, the peak of the island. The house itself was inhabited by roaches, rats, and some bird (sounded like a pigeon). What follows are pictures I snapped quickly in 3 minutes – I was travelling light, with only a killing jar and the camera body with standard lens (no extension tubes or tripod). The aim of this post is to show you that insects are very easy to observe in nature – all you need to do is make sure the weather’s cool (not too hot, not too cold), and find somewhere where there’s a strong scent or strong primary colours – blooming trees or flower fields are the best.

All pictures have been cropped and downgraded to save webspace (also, not having the equipment means the pictures are not that good in the first place). I will also leave IDs off. You all can try and identify, or ask for tips :)

This being the mountains, coccinellids were pretty common. While they’re commonly known as biocontrol agents in agriculture, many coccinellids also have a reputation as cold-weather and high-altitude specialists. The following picture, for example, shows a coccinellid I took a picture of in March, found on a rock cropping out from the blanket of snow covering the mountain (temperature at the time ~1°C).

So, if you’re interested in observing ladybirds, your best bet is to go in the colder habitats.

The tree was inhabited by many beetles. Here’s two of them; such beetles are very easily collectable simply by placing a sheet under the tree, or holding a tray under the branch, and shaking. They all fall off and you can pick them off quickly before the fly off (usually they walk around in a daze, best time to grab them).

This one’s a pathetically out of focus multi-order image, and multi-trophic level image too: you have the carnivorous wasp (Hymenoptera), the beetles, and the pentatomid (Heteroptera) hiding underneath.

Some more beetles. The big brown one is especially attracted to colour – I was wearing a light blue t-shirt and always had at least two or three climbing on it.

I like to imagine this pentatomid feeling triumphant.

Here you can see the pentatomid. At all temperate times of the year, pentatomids invade the pine tree regions and can be found forming such congregations. On the left you see a game of hide-and-seek between the carnivorous ladybird and its herbivorous would-be prey (I don’t know whether it got eaten – this was all in three minutes, remember?).

Where there are flowers, there are bumblebees. You can tell this one’s pretty large.

Some more multi-order goodness. What the black thing under the coccinellid is is anyone’s guess. The out-of-depth-of-field brown blob is a hemipteran (of the leafhopper planthopper variety I would never dream of getting mixed up with).

And, moving away from the tree and its diverse fauna (much of which was way too small to photograph using a standard 35 mm lens), here’s a fly washing its hands.

Coming back to the car, I noticed many brown masses on the hood and roof. My car was a very welcome source of heat in the otherwise cool surroundings, and was quickly colonised by adventurous insects, like this water beetle look-alike. And by quickly, I mean a spider had built a web between the antenna and the roof in the five minutes I was gone.

And all this was merely during a 5 minute quick look in the area (I actually took a wrong turn and stumbled on this place). For parents or teachers reading, if you want to get your kids/students interested in insects or wildlife, simply find a fragrant tree in bloom and sit in front of it and observe.

And if you want more posts like this, please support my Petridish project, Toxic Geology: A Cause of Insect Endemism in Cyprus. It aims to investigate such habitats. You can find more details on the project page. Sharing it around your friends would be greatly appreciated; donating as well. Thanks!





Pholcids

21 09 2011

When I was living in Germany, my room was in the cellar/basement of a house. The most abundant macroscopic organisms in my room are the subject of this post: pholcids. Anyone who has a dusty, somewhat dark room (e.g. a basement, or a cave) will recognise them: they’re the spiders with the really long legs and the really tiny bodies (the first leg is at least twice as long as the body), you can’t miss them. For USAnians, the most common one you find at home is Spermophora senoculata (pers. comm. from a friend in New York, maybe different in other areas). Read the rest of this entry »





Short Hiatus, My Cyprus Projects, and a Link

30 08 2011

I have just undertaken a major migration from Germany to Cyprus, and it will take a while for me to get settled (I have three boxes of books and papers to sort through -_-). This means there will be a short break in posting. With hindsight, I probably should have used the opportunity to write a post on migrations. Missed opportunities. Instead, I’ll just give you an introduction to what I’m doing on this hellhole of an island (I grew up here – all those tourism pictures are examples of a highly-successful propaganda/PR machine). Read the rest of this entry »








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